SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17259459	0.95[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.92[TSI][hapmap];0.93[EUR][1000 genomes]
rs173355	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs242605	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs242607	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs242608	1.00[CEU][hapmap];0.85[GIH][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs242609	1.00[CEU][hapmap];0.92[GIH][hapmap];0.92[MEX][hapmap];0.85[MKK][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs381619	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs442268	0.88[EUR][1000 genomes]
rs6058523	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6061154	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6089171	0.90[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes]
rs6119758	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
DUSP15	Distal transcriptional regulation
HCK	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)