SNP Report

Basic Infomation

Name	rs6104289 dbSNP
Location	chr:20,44314911
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11697671	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11699641	1.00[CEU][hapmap]
rs2231829	0.81[GIH][hapmap]
rs3092516	0.86[JPT][hapmap]
rs4434050	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];0.93[EUR][1000 genomes]
rs6017649	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6032346	0.86[JPT][hapmap]
rs6032347	0.86[JPT][hapmap]
rs6032349	1.00[CEU][hapmap];0.92[CHB][hapmap];0.93[JPT][hapmap];0.93[EUR][1000 genomes]
rs6032350	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.93[EUR][1000 genomes]
rs6032389	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.93[JPT][hapmap];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6032402	0.85[ASN][1000 genomes]
rs6032403	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6032421	0.92[AFR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6032436	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6032440	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6094182	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6104239	0.92[CHB][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];0.93[EUR][1000 genomes]
rs6104272	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6104296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6514062	1.00[CEU][hapmap]
rs7271419	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC10B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)