SNP Report

Basic Infomation

Name	rs6032389 dbSNP
Location	chr:20,44260537
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11697671	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11699641	1.00[CEU][hapmap]
rs2425702	0.81[ASN][1000 genomes]
rs3092516	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs4434050	1.00[CEU][hapmap];0.92[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6017649	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6032346	0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs6032347	0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs6032349	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6032350	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6032402	0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6032403	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6032421	0.86[ASN][1000 genomes]
rs6032436	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6032440	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6094182	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6104239	0.92[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6104272	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6104289	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[CHD][hapmap];0.93[JPT][hapmap];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6104296	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs6514062	1.00[CEU][hapmap]
rs7271419	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC9	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)