SNP Report

Basic Infomation

Name	rs6104239 dbSNP
Location	chr:20,44212637
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11697671	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2231829	0.81[GIH][hapmap];1.00[TSI][hapmap]
rs2272951	1.00[TSI][hapmap]
rs2425702	0.85[ASN][1000 genomes]
rs3092516	0.81[CHB][hapmap];0.94[JPT][hapmap];0.94[ASN][1000 genomes]
rs3746593	1.00[TSI][hapmap]
rs4434050	1.00[ASW][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6017649	1.00[EUR][1000 genomes]
rs6032346	0.81[CHB][hapmap];0.84[CHD][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs6032347	0.86[CHB][hapmap];0.87[JPT][hapmap];0.95[ASN][1000 genomes]
rs6032349	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6032350	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6032389	0.92[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6032403	0.92[EUR][1000 genomes]
rs6032436	0.93[EUR][1000 genomes]
rs6032440	0.93[EUR][1000 genomes]
rs6094182	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6104272	0.93[EUR][1000 genomes]
rs6104289	0.92[CHB][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];0.93[EUR][1000 genomes]
rs6104296	0.92[CHB][hapmap];0.93[JPT][hapmap]
rs6130837	1.00[TSI][hapmap]
rs7271419	0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC8	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)