SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2050095	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2272951	1.00[TSI][hapmap]
rs3746593	1.00[ASW][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4434050	0.81[GIH][hapmap];1.00[TSI][hapmap]
rs6032262	1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6032276	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs6104239	0.81[GIH][hapmap];1.00[TSI][hapmap]
rs6104289	0.81[GIH][hapmap]
rs6130837	1.00[TSI][hapmap]
rs73910253	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8124864	0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
EPPIN	Proximal transcriptional regulation
EPPIN-WFDC6	Proximal transcriptional regulation
PCIF1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)