SNP Report
Name | rs6094202   dbSNP |
---|---|
Location | chr:20,44337792 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1386504 | 0.88[CEU][hapmap] |
rs1386505 | 0.83[CEU][hapmap] |
rs1487317 | 0.88[CEU][hapmap] |
rs1487320 | 0.81[CEU][hapmap] |
rs232262 | 1.00[CEU][hapmap];0.97[EUR][1000 genomes] |
rs232263 | 0.88[EUR][1000 genomes] |
rs232267 | 0.91[EUR][1000 genomes] |
rs232268 | 0.91[EUR][1000 genomes] |
rs232270 | 0.91[EUR][1000 genomes] |
rs232285 | 0.90[EUR][1000 genomes] |
rs232286 | 0.92[CEU][hapmap];0.89[EUR][1000 genomes] |
rs232290 | 0.96[CEU][hapmap];0.91[EUR][1000 genomes] |
rs232291 | 0.92[CEU][hapmap];0.91[EUR][1000 genomes] |
rs376206 | 0.88[CEU][hapmap] |
rs380421 | 0.88[CEU][hapmap] |
rs454402 | 0.88[CEU][hapmap] |
rs456212 | 0.89[CEU][hapmap] |
rs459955 | 0.88[CEU][hapmap] |
rs462145 | 0.88[CEU][hapmap] |
rs6017653 | 0.89[EUR][1000 genomes] |
rs6017667 | 0.88[CEU][hapmap] |
rs6032449 | 1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6032454 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6032467 | 0.89[EUR][1000 genomes] |
rs6032468 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs6032469 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6032471 | 0.88[CEU][hapmap] |
rs6032473 | 0.92[CEU][hapmap] |
rs6032474 | 0.88[CEU][hapmap] |
rs980984 | 0.81[CEU][hapmap];0.81[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
WFDC10B | Proximal transcriptional regulation |
MIR3617 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014