SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1386504	0.88[CEU][hapmap]
rs1386505	0.83[CEU][hapmap]
rs1487317	0.88[CEU][hapmap]
rs1487320	0.81[CEU][hapmap]
rs232262	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs232263	0.88[EUR][1000 genomes]
rs232267	0.91[EUR][1000 genomes]
rs232268	0.91[EUR][1000 genomes]
rs232270	0.91[EUR][1000 genomes]
rs232285	0.90[EUR][1000 genomes]
rs232286	0.92[CEU][hapmap];0.89[EUR][1000 genomes]
rs232290	0.96[CEU][hapmap];0.91[EUR][1000 genomes]
rs232291	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs376206	0.88[CEU][hapmap]
rs380421	0.88[CEU][hapmap]
rs454402	0.88[CEU][hapmap]
rs456212	0.89[CEU][hapmap]
rs459955	0.88[CEU][hapmap]
rs462145	0.88[CEU][hapmap]
rs6017653	0.89[EUR][1000 genomes]
rs6017667	0.88[CEU][hapmap]
rs6032449	1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6032454	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6032467	0.89[EUR][1000 genomes]
rs6032468	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6032469	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6032471	0.88[CEU][hapmap]
rs6032473	0.92[CEU][hapmap]
rs6032474	0.88[CEU][hapmap]
rs980984	0.81[CEU][hapmap];0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC10B	Proximal transcriptional regulation
MIR3617	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)