SNP Report
Name | rs232270   dbSNP |
---|---|
Location | chr:20,44346426 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs232259 | 0.89[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs232262 | 0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs232263 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs232267 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs232268 | 0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs232285 | 0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs232286 | 0.81[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs232290 | 0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs232291 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6017653 | 0.81[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6032449 | 0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6032454 | 0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6032467 | 0.81[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6032468 | 0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6032469 | 0.88[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6094202 | 0.91[EUR][1000 genomes] |
rs980984 | 0.93[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
SPINT4 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014