SNP Report
Basic Infomation
| Name | rs6074032 dbSNP |
|---|---|
| Location | chr:20,44763320 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11698283 | 0.95[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs13045795 | 0.97[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs1535043 | 0.83[EUR][1000 genomes] |
| rs1883833 | 0.97[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs2012180 | 0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs2868765 | 0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs3765459 | 0.86[AFR][1000 genomes];0.86[ASN][1000 genomes] |
| rs6032678 | 0.83[ASN][1000 genomes] |
| rs6065931 | 0.90[ASN][1000 genomes] |
| rs6074021 | 0.83[ASN][1000 genomes] |
| rs6074028 | 0.82[ASN][1000 genomes] |
| rs6074036 | 0.95[EUR][1000 genomes] |
| rs6074037 | 0.94[EUR][1000 genomes] |
| rs6074040 | 0.87[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs73115010 | 0.86[AFR][1000 genomes];0.86[ASN][1000 genomes] |
| rs747759 | 0.83[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014