SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696696	0.97[ASN][1000 genomes]
rs11698283	0.82[CEU][hapmap];0.87[EUR][1000 genomes]
rs13045795	0.84[EUR][1000 genomes]
rs1321003	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1883833	0.82[CEU][hapmap];0.82[LWK][hapmap];0.86[MKK][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes]
rs1883838	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2012180	0.83[EUR][1000 genomes]
rs2868765	0.83[EUR][1000 genomes]
rs4813004	0.99[ASN][1000 genomes]
rs4813005	0.99[ASN][1000 genomes]
rs6017741	0.97[ASN][1000 genomes]
rs6017742	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs6032676	0.84[ASN][1000 genomes]
rs6074032	0.83[EUR][1000 genomes]
rs6074036	0.82[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6074037	0.82[CEU][hapmap];0.94[CHB][hapmap];0.93[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs747759	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
NCOA5	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)