SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13045795	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1535043	0.82[CEU][hapmap];0.87[EUR][1000 genomes]
rs1883833	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2012180	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2868765	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6032678	0.82[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes]
rs6065931	1.00[ASN][1000 genomes]
rs6074021	0.85[JPT][hapmap]
rs6074032	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6074036	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6074037	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6074040	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs747759	0.82[CEU][hapmap];0.87[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC35C2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)