SNP Report

Basic Infomation

Name	rs6073784 dbSNP
Location	chr:20,44201931
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696176	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11696685	0.80[ASN][1000 genomes]
rs1487325	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2171371	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2272961	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4812909	0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6017637	0.80[EUR][1000 genomes]
rs6065823	0.83[JPT][hapmap];0.82[EUR][1000 genomes]
rs6065827	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6073759	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6073768	0.94[JPT][hapmap];0.85[AMR][1000 genomes]
rs6073774	0.87[AMR][1000 genomes]
rs6073823	0.87[EUR][1000 genomes]
rs6073825	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6073833	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6073834	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6073846	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6073849	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6073862	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs6094184	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6104252	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6104257	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6104285	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs6104291	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6104293	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6104298	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6124722	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6130846	0.82[EUR][1000 genomes]
rs6130855	0.86[EUR][1000 genomes]
rs6130865	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6130897	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs714595	1.00[CHB][hapmap];0.94[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CCNB1IP1P2	Proximal transcriptional regulation
CCNB1IP1P2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)