SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696176	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11696501	0.93[CEU][hapmap];0.87[MEX][hapmap]
rs1487325	0.85[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs2171371	0.85[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs2227290	0.82[MEX][hapmap]
rs2235584	0.82[MEX][hapmap]
rs2272961	0.85[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs4812909	0.85[CEU][hapmap];0.85[JPT][hapmap];0.88[AMR][1000 genomes]
rs6065827	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6073759	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6073768	0.85[CEU][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.95[MEX][hapmap];0.82[TSI][hapmap];0.91[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6073774	0.90[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6073784	0.83[JPT][hapmap];0.82[EUR][1000 genomes]
rs6073825	0.85[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs6073833	0.85[JPT][hapmap]
rs6073834	0.84[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs6073846	0.85[JPT][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs6073849	0.84[JPT][hapmap]
rs6104285	0.84[JPT][hapmap];0.86[MEX][hapmap];0.81[TSI][hapmap]
rs6130846	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6130855	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000237464	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 7)