SNP Report

Basic Infomation

Name	rs6104252 dbSNP
Location	chr:20,44254323
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11696685	0.85[ASN][1000 genomes]
rs1487319	0.84[ASN][1000 genomes]
rs1487325	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2072974	0.84[ASN][1000 genomes]
rs2171371	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2272961	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4812909	0.85[ASN][1000 genomes]
rs4812943	0.89[EUR][1000 genomes]
rs4812955	0.81[ASN][1000 genomes]
rs6017637	0.89[EUR][1000 genomes]
rs6065852	0.84[ASN][1000 genomes]
rs6065859	0.84[ASN][1000 genomes]
rs6065863	0.84[ASN][1000 genomes]
rs6065866	0.81[ASN][1000 genomes]
rs6073784	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6073823	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6073825	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6073831	0.82[ASN][1000 genomes]
rs6073833	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6073834	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6073846	0.84[ASN][1000 genomes]
rs6073849	0.84[ASN][1000 genomes]
rs6073850	0.84[ASN][1000 genomes]
rs6073859	0.80[ASN][1000 genomes]
rs6073861	0.81[ASN][1000 genomes]
rs6094184	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6094197	0.80[ASN][1000 genomes]
rs6104257	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6104273	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6104285	0.85[ASN][1000 genomes]
rs6104290	0.80[ASN][1000 genomes]
rs6104291	0.81[ASN][1000 genomes]
rs6104293	0.81[ASN][1000 genomes]
rs6104294	0.80[ASN][1000 genomes]
rs6104295	0.81[ASN][1000 genomes]
rs6124722	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6124727	0.80[ASN][1000 genomes]
rs6130865	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6130877	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6130893	0.81[ASN][1000 genomes]
rs6130894	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC10A	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)