SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1157672	0.91[CHB][hapmap];0.81[JPT][hapmap];0.96[ASN][1000 genomes]
rs1487320	1.00[CHB][hapmap];0.91[JPT][hapmap];0.99[ASN][1000 genomes]
rs1487322	0.96[ASN][1000 genomes]
rs1487323	0.96[ASN][1000 genomes]
rs1487325	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs2171371	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs2179457	0.96[ASN][1000 genomes]
rs2272961	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs2425723	0.86[CHB][hapmap];0.82[JPT][hapmap];0.96[ASN][1000 genomes]
rs2425724	0.96[ASN][1000 genomes]
rs2425732	0.91[CHB][hapmap];0.91[ASN][1000 genomes]
rs2425733	0.89[ASN][1000 genomes]
rs2425734	0.89[ASN][1000 genomes]
rs3091838	0.96[ASN][1000 genomes]
rs3091839	0.81[ASN][1000 genomes]
rs3091917	0.96[ASN][1000 genomes]
rs3092029	0.81[ASN][1000 genomes]
rs3092373	0.90[ASN][1000 genomes]
rs3092666	1.00[CHB][hapmap];0.81[JPT][hapmap];0.96[ASN][1000 genomes]
rs6017637	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6073823	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6073825	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs6073833	0.88[CEU][hapmap]
rs6073834	0.86[CEU][hapmap]
rs6073846	0.86[CEU][hapmap]
rs6073849	0.82[CEU][hapmap]
rs6094184	0.89[EUR][1000 genomes]
rs6104252	0.89[EUR][1000 genomes]
rs6104257	0.88[EUR][1000 genomes]
rs6104285	0.85[CEU][hapmap]
rs6104291	0.82[CEU][hapmap]
rs6104298	0.88[CEU][hapmap]
rs6124722	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
WFDC9	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)