SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10854116	0.88[ASN][1000 genomes]
rs11085732	0.93[ASN][1000 genomes]
rs11670504	0.96[ASN][1000 genomes]
rs11881782	0.89[ASN][1000 genomes]
rs12977594	0.88[ASN][1000 genomes]
rs12978105	0.87[ASN][1000 genomes]
rs12978984	0.88[ASN][1000 genomes]
rs12983665	0.98[ASN][1000 genomes]
rs1352426	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1387025	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17697965	0.88[ASN][1000 genomes]
rs2358681	0.93[EUR][1000 genomes]
rs2633971	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34159543	0.86[ASN][1000 genomes]
rs34246431	0.95[ASN][1000 genomes]
rs35916055	0.89[ASN][1000 genomes]
rs477174	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4804133	0.94[ASN][1000 genomes]
rs4804134	0.94[EUR][1000 genomes]
rs6417247	0.88[ASN][1000 genomes]
rs6511698	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7247893	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7249459	0.93[ASN][1000 genomes]
rs7253185	0.82[ASN][1000 genomes]
rs7253917	0.88[ASN][1000 genomes]
rs7260594	0.82[ASN][1000 genomes]
rs753859	0.81[ASN][1000 genomes]
rs8112675	0.98[ASN][1000 genomes]
rs9807913	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PDE4A	Proximal transcriptional regulation
KEAP1	Distal transcriptional regulation
PDE4A	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)