SNP Report

Basic Infomation

Name	rs7249459 dbSNP
Location	chr:19,10537092
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10854116	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11085732	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11670504	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11881782	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12977594	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12978105	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12978984	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12983665	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1352426	0.94[ASN][1000 genomes]
rs1387025	0.94[ASN][1000 genomes]
rs17697965	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2043330	0.86[EUR][1000 genomes]
rs2633971	0.87[ASN][1000 genomes]
rs34159543	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34246431	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34266232	0.81[ASN][1000 genomes]
rs34681319	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs35615354	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35916055	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3760650	0.80[ASN][1000 genomes]
rs477174	0.92[ASN][1000 genomes]
rs4804133	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs513663	0.93[ASN][1000 genomes]
rs6417247	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6511698	0.87[ASN][1000 genomes]
rs7253185	0.88[EUR][1000 genomes]
rs7253917	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7260594	0.88[EUR][1000 genomes]
rs8112449	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8112675	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PDE4A	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)