SNP Report
| Name | rs41263861   dbSNP |
|---|---|
| Location | chr:12,48375668 |
| Allele | C/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10219510 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs12300271 | 0.92[EUR][1000 genomes] |
| rs12721425 | 0.82[EUR][1000 genomes] |
| rs12721426 | 0.82[EUR][1000 genomes] |
| rs12721427 | 0.82[EUR][1000 genomes] |
| rs17801742 | 1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs35000511 | 0.82[EUR][1000 genomes] |
| rs41263845 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs41272749 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs41272777 | 0.82[EUR][1000 genomes] |
| rs41317929 | 0.83[AMR][1000 genomes] |
| rs41317933 | 0.83[AMR][1000 genomes] |
| rs41317939 | 0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs55744743 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs55967487 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs56010633 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs56196515 | 0.82[EUR][1000 genomes] |
| rs56387272 | 0.98[EUR][1000 genomes] |
| rs57444859 | 0.92[EUR][1000 genomes] |
| rs73297161 | 0.87[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| COL2A1 | Proximal transcriptional regulation |
| COL2A1 | Distal transcriptional regulation |
| COL2A1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




