SNP Report
| Name | rs41272749   dbSNP |
|---|---|
| Location | chr:12,48371045 |
| Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11503873 | 0.90[EUR][1000 genomes] |
| rs12300271 | 0.80[EUR][1000 genomes] |
| rs12313208 | 0.90[EUR][1000 genomes] |
| rs12721425 | 1.00[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs12721426 | 1.00[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs12721427 | 1.00[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs1541408 | 1.00[AFR][1000 genomes];0.90[EUR][1000 genomes] |
| rs17801742 | 0.83[AMR][1000 genomes] |
| rs2408878 | 0.90[EUR][1000 genomes] |
| rs35000511 | 1.00[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs41263861 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs41272777 | 0.98[EUR][1000 genomes] |
| rs55698101 | 1.00[AFR][1000 genomes] |
| rs55967487 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs56196515 | 1.00[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs56387272 | 0.85[EUR][1000 genomes] |
| rs7135926 | 0.90[EUR][1000 genomes] |
| rs73297161 | 0.92[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| COL2A1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




