SNP Report
Name | rs3867127   dbSNP |
---|---|
Location | chr:11,64655032 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10488702 | 1.00[CEU][hapmap] |
rs11827610 | 1.00[CEU][hapmap];0.85[EUR][1000 genomes] |
rs12286941 | 0.91[EUR][1000 genomes] |
rs17146407 | 1.00[CEU][hapmap];0.81[EUR][1000 genomes] |
rs17146506 | 1.00[CEU][hapmap] |
rs17146508 | 1.00[CEU][hapmap] |
rs17146511 | 1.00[CEU][hapmap] |
rs17146515 | 1.00[CEU][hapmap] |
rs17146519 | 1.00[CEU][hapmap] |
rs17146528 | 1.00[CEU][hapmap] |
rs17146539 | 1.00[CEU][hapmap] |
rs17146541 | 1.00[CEU][hapmap] |
rs17146543 | 1.00[CEU][hapmap] |
rs17146544 | 1.00[CEU][hapmap] |
rs17146569 | 1.00[CEU][hapmap] |
rs17146575 | 1.00[CEU][hapmap] |
rs35079323 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes] |
rs35115827 | 0.88[EUR][1000 genomes] |
rs3888184 | 1.00[CEU][hapmap] |
rs4320955 | 1.00[CEU][hapmap] |
rs57365630 | 0.91[EUR][1000 genomes] |
rs59677833 | 0.85[EUR][1000 genomes] |
rs60711419 | 0.88[EUR][1000 genomes] |
rs61741079 | 0.91[EUR][1000 genomes] |
rs61742063 | 0.91[EUR][1000 genomes] |
rs628595 | 1.00[CEU][hapmap];0.80[EUR][1000 genomes] |
rs643949 | 0.80[EUR][1000 genomes] |
rs7102350 | 1.00[CEU][hapmap];0.85[EUR][1000 genomes] |
rs7103328 | 1.00[CEU][hapmap] |
rs7113751 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes] |
rs7123368 | 1.00[CEU][hapmap] |
rs7482817 | 1.00[CEU][hapmap] |
rs7942472 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
SF1 | Distal transcriptional regulation |
ENSG00000269038 | Distal transcriptional regulation |
ATG2A | Distal transcriptional regulation |
PPP2R5B | Distal transcriptional regulation |
POLA2 | Distal transcriptional regulation |
MALAT1 | Distal transcriptional regulation |
ENSG00000270117 | Distal transcriptional regulation |
ENSG00000255173 | Distal transcriptional regulation |
ZNHIT2 | Distal transcriptional regulation |
SNX15 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014