SNP Report

Basic Infomation

Name	rs35744813 dbSNP
Location	chr:1,1265460
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10399878	0.81[ASN][1000 genomes]
rs10907179	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11260584	0.86[ASN][1000 genomes]
rs12731385	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1810745	0.92[ASN][1000 genomes]
rs1886772	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1886773	0.92[ASN][1000 genomes]
rs2296471	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2296472	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2296475	0.86[ASN][1000 genomes]
rs2477784	0.84[ASN][1000 genomes]
rs2649610	0.86[ASN][1000 genomes]
rs2765021	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs307346	0.99[ASN][1000 genomes]
rs307348	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs307349	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs307350	0.84[ASN][1000 genomes]
rs307354	0.96[ASN][1000 genomes]
rs307355	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs307357	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs307359	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs307364	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs307365	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs307368	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs307371	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34380086	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34389364	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34782209	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34876581	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35694341	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35993679	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3766183	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3766185	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3845293	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3855956	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4970365	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4970432	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4970433	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4970439	0.83[ASN][1000 genomes]
rs61766199	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61766214	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
TAS1R3	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)