SNP Report

Basic Infomation

Name	rs34782209 dbSNP
Location	chr:1,1294518
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 45)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10907179	0.84[EUR][1000 genomes]
rs1240712	0.81[AMR][1000 genomes]
rs12731385	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1886772	0.84[EUR][1000 genomes]
rs2242398	0.84[AMR][1000 genomes]
rs2296471	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2296472	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2477776	0.84[AMR][1000 genomes]
rs2477784	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2649587	0.82[AMR][1000 genomes]
rs2649589	0.84[AMR][1000 genomes]
rs2649591	0.84[AMR][1000 genomes]
rs2649594	0.84[AMR][1000 genomes]
rs2649610	0.93[ASN][1000 genomes]
rs2765021	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2765023	0.81[ASN][1000 genomes]
rs307346	0.80[ASN][1000 genomes]
rs307348	0.82[ASN][1000 genomes]
rs307349	0.81[ASN][1000 genomes]
rs307355	0.81[EUR][1000 genomes]
rs307357	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs307359	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs307364	0.93[ASN][1000 genomes]
rs307365	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs307368	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs307371	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34380086	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34389364	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34639471	0.82[ASN][1000 genomes]
rs34734423	0.83[ASN][1000 genomes]
rs34876581	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35694341	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35744813	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35993679	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3766183	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3766185	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3845293	0.81[EUR][1000 genomes]
rs3845295	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3855956	0.93[ASN][1000 genomes]
rs3889966	0.88[ASN][1000 genomes]
rs4970365	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4970432	0.84[EUR][1000 genomes]
rs4970433	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4970439	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61766214	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MXRA8	Proximal transcriptional regulation
TMEM88B	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)