SNP Report
Name | rs35557860   dbSNP |
---|---|
Location | chr:10,35486477 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11592037 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11592064 | 0.81[AMR][1000 genomes] |
rs11592356 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11592886 | 0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11592925 | 0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11592989 | 0.81[EUR][1000 genomes] |
rs11594771 | 0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11595640 | 0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs11595890 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11596128 | 0.81[AMR][1000 genomes] |
rs11597746 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11597913 | 0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs11598685 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11598690 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11599196 | 0.85[AMR][1000 genomes] |
rs11599288 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11599920 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12098294 | 0.92[EUR][1000 genomes] |
rs1213385 | 0.97[EUR][1000 genomes] |
rs12761577 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12762124 | 0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12762891 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs12765063 | 0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs12767102 | 0.85[AMR][1000 genomes] |
rs12767868 | 0.85[AMR][1000 genomes] |
rs12768323 | 0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs12769539 | 0.91[EUR][1000 genomes] |
rs12770381 | 0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12774368 | 0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12775079 | 0.81[AMR][1000 genomes] |
rs12775829 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12777222 | 0.85[AMR][1000 genomes] |
rs12778629 | 0.85[AMR][1000 genomes] |
rs12780255 | 0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12782377 | 0.89[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs16935922 | 0.92[EUR][1000 genomes] |
rs17499780 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs17500653 | 0.87[ASN][1000 genomes] |
rs17583945 | 0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs17583959 | 0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs2384353 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs34001864 | 0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs34006545 | 0.92[EUR][1000 genomes] |
rs34091150 | 0.83[ASN][1000 genomes] |
rs34233967 | 0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs34306263 | 0.87[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs34357042 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs34595862 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs34658029 | 0.81[AMR][1000 genomes] |
rs34694028 | 0.92[EUR][1000 genomes] |
rs35013161 | 0.92[EUR][1000 genomes] |
rs35133865 | 0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs35168556 | 0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs35356037 | 0.81[AMR][1000 genomes] |
rs35444718 | 0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs35550382 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs35714830 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs35807819 | 0.81[AMR][1000 genomes] |
rs35965004 | 0.87[ASN][1000 genomes] |
rs56919928 | 0.81[AMR][1000 genomes] |
rs58468612 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs59621927 | 0.81[AMR][1000 genomes] |
rs60648958 | 0.81[AMR][1000 genomes] |
rs61161332 | 0.81[AMR][1000 genomes] |
rs67948565 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7090722 | 0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs72789691 | 0.81[AMR][1000 genomes] |
rs72793871 | 0.90[EUR][1000 genomes] |
rs7923532 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs877779 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000230534 | Distal transcriptional regulation |
CREM | Distal transcriptional regulation |
CREM | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014