SNP Report

Basic Infomation

Name	rs12769539 dbSNP
Location	chr:10,35524202
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11592989	0.82[AMR][1000 genomes]
rs11598685	0.91[EUR][1000 genomes]
rs11598690	0.91[EUR][1000 genomes]
rs11599288	0.91[EUR][1000 genomes]
rs11599920	0.91[EUR][1000 genomes]
rs12098294	0.99[EUR][1000 genomes]
rs1213385	0.89[EUR][1000 genomes]
rs12761577	0.89[EUR][1000 genomes]
rs12762124	0.88[EUR][1000 genomes]
rs12762891	0.87[EUR][1000 genomes]
rs12774368	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12780255	0.88[EUR][1000 genomes]
rs16935922	0.99[EUR][1000 genomes]
rs2384353	0.91[EUR][1000 genomes]
rs34001864	0.90[EUR][1000 genomes]
rs34006545	0.99[EUR][1000 genomes]
rs34233967	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34357042	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34694028	0.99[EUR][1000 genomes]
rs35013161	0.99[EUR][1000 genomes]
rs35444718	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35557860	0.91[EUR][1000 genomes]
rs58468612	0.91[EUR][1000 genomes]
rs67948565	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72793871	0.97[EUR][1000 genomes]
rs7923532	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)