SNP Report
Name | rs12769539   dbSNP |
---|---|
Location | chr:10,35524202 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11592989 | 0.82[AMR][1000 genomes] |
rs11598685 | 0.91[EUR][1000 genomes] |
rs11598690 | 0.91[EUR][1000 genomes] |
rs11599288 | 0.91[EUR][1000 genomes] |
rs11599920 | 0.91[EUR][1000 genomes] |
rs12098294 | 0.99[EUR][1000 genomes] |
rs1213385 | 0.89[EUR][1000 genomes] |
rs12761577 | 0.89[EUR][1000 genomes] |
rs12762124 | 0.88[EUR][1000 genomes] |
rs12762891 | 0.87[EUR][1000 genomes] |
rs12774368 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs12780255 | 0.88[EUR][1000 genomes] |
rs16935922 | 0.99[EUR][1000 genomes] |
rs2384353 | 0.91[EUR][1000 genomes] |
rs34001864 | 0.90[EUR][1000 genomes] |
rs34006545 | 0.99[EUR][1000 genomes] |
rs34233967 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs34357042 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs34694028 | 0.99[EUR][1000 genomes] |
rs35013161 | 0.99[EUR][1000 genomes] |
rs35444718 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs35557860 | 0.91[EUR][1000 genomes] |
rs58468612 | 0.91[EUR][1000 genomes] |
rs67948565 | 0.88[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs72793871 | 0.97[EUR][1000 genomes] |
rs7923532 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000233200 | Proximal transcriptional regulation |
ENSG00000253070 | Proximal transcriptional regulation |
ENSG00000230534 | Distal transcriptional regulation |
CREM | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014