SNP Report
Basic Infomation
| Name | rs35013161 dbSNP |
|---|---|
| Location | chr:10,35522146 |
| Allele | T/G |
LD-proxy of rSNPs(r2>0.8) (count: 25)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11598685 | 0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs11598690 | 0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs11599288 | 0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs11599920 | 0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12098294 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs1213385 | 0.90[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs12761577 | 0.90[EUR][1000 genomes] |
| rs12762124 | 0.89[EUR][1000 genomes] |
| rs12762891 | 0.88[EUR][1000 genomes] |
| rs12769539 | 0.99[EUR][1000 genomes] |
| rs12774368 | 0.94[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12780255 | 0.89[EUR][1000 genomes] |
| rs16935922 | 0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2384353 | 0.92[EUR][1000 genomes] |
| rs34001864 | 0.90[EUR][1000 genomes] |
| rs34006545 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34233967 | 0.92[EUR][1000 genomes] |
| rs34357042 | 0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs34694028 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35444718 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs35557860 | 0.92[EUR][1000 genomes] |
| rs58468612 | 0.92[EUR][1000 genomes] |
| rs67948565 | 1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs72793871 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7923532 | 0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000233200 | Proximal transcriptional regulation |
| ENSG00000253070 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014