SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946216	0.85[CEU][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11575078	0.81[AMR][1000 genomes]
rs1571878	0.88[CEU][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1854853	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3093017	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3093018	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3093019	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3093023	0.83[CEU][hapmap];0.84[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3093024	0.92[CEU][hapmap];0.84[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4710185	0.80[CEU][hapmap]
rs6907666	0.92[CEU][hapmap];0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCR6	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)