SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946216	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1331299	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1571878	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1854853	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1855025	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3093017	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3093019	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3093023	0.83[EUR][1000 genomes]
rs3093024	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3093025	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3093026	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCR6	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)