SNP Report

Basic Infomation

Name	rs28740190 dbSNP
Location	chr:12,40349231
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10877823	1.00[YRI][hapmap]
rs10877832	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs10877837	1.00[YRI][hapmap]
rs11174315	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs11174338	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs11559994	1.00[YRI][hapmap]
rs11564198	0.82[CHB][hapmap]
rs11564285	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs12230558	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs17442283	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17458100	1.00[CHB][hapmap]
rs17458452	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17489542	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17518134	1.00[CHB][hapmap]
rs28370600	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs28370638	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs28370640	1.00[CHB][hapmap]
rs28370664	0.83[CHB][hapmap]
rs28370674	1.00[CHB][hapmap]
rs28370675	1.00[CHB][hapmap]
rs28370692	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs28370694	1.00[CHB][hapmap]
rs28370709	1.00[AFR][1000 genomes]
rs28370728	0.82[YRI][hapmap]
rs28370729	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs28370742	0.90[JPT][hapmap]
rs28370828	1.00[CHB][hapmap]
rs61931461	0.84[AFR][1000 genomes]
rs7297783	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs7316296	1.00[YRI][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)