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rVarBase
SNP Report
Basic Infomation
Name
rs28370638  
dbSNP
Location
chr:12,40385663
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11564198
0.82[CHB][hapmap]
rs17442283
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17458100
1.00[CHB][hapmap]
rs17458452
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17489542
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17518134
1.00[CHB][hapmap]
rs28370640
1.00[CHB][hapmap]
rs28370664
0.83[CHB][hapmap]
rs28370674
1.00[CHB][hapmap]
rs28370675
1.00[CHB][hapmap]
rs28370694
1.00[CHB][hapmap]
rs28370729
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs28370742
0.89[JPT][hapmap]
rs28370828
1.00[CHB][hapmap]
rs28740190
1.00[CHB][hapmap];1.00[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
SLC2A13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)