SNP Report

Basic Infomation

Name	rs2259547 dbSNP
Location	chr:10,82008128
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10887649	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs10887670	1.00[CHB][hapmap];0.96[JPT][hapmap]
rs10887710	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs11202403	0.82[JPT][hapmap]
rs12217395	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12219032	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12411782	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs12411806	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12773664	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs1298908	1.00[CHB][hapmap]
rs2236568	0.84[CHB][hapmap]
rs2573326	1.00[CHB][hapmap]
rs2993763	0.83[CHB][hapmap]
rs2994388	0.83[CHB][hapmap]
rs3000954	0.87[CHB][hapmap]
rs4934028	0.83[CHB][hapmap]
rs7081164	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7092394	1.00[CHB][hapmap];1.00[JPT][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)