SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10887670	0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs10887710	0.83[CEU][hapmap];0.81[GIH][hapmap];0.83[MEX][hapmap];0.96[TSI][hapmap]
rs11202165	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11202248	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11202403	0.84[CEU][hapmap]
rs12217395	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12219032	0.84[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap]
rs12411782	0.95[CHB][hapmap];0.95[CHD][hapmap];0.86[JPT][hapmap]
rs12411806	0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[JPT][hapmap]
rs12773664	0.87[CHB][hapmap];0.95[CHD][hapmap]
rs1298908	0.95[CHB][hapmap];0.93[CHD][hapmap]
rs2259547	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs2573326	0.95[CHB][hapmap];0.93[CHD][hapmap]
rs2993763	0.84[CHD][hapmap]
rs2994388	0.84[CHD][hapmap]
rs3000954	0.83[CHB][hapmap];0.95[CHD][hapmap];0.82[ASN][1000 genomes]
rs3827869	0.84[CHD][hapmap]
rs3851059	0.84[CHD][hapmap]
rs4933327	0.84[CHD][hapmap]
rs4934027	0.86[CHD][hapmap]
rs4934028	0.84[CHD][hapmap]
rs7081164	0.84[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap]
rs7092394	0.84[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap]
rs74145425	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ANXA11	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)