SNP Report

Basic Infomation

Name	rs1882348 dbSNP
Location	chr:2,102984671
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11123923	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11688559	0.83[AFR][1000 genomes]
rs11688568	0.82[AFR][1000 genomes]
rs11688573	0.82[AFR][1000 genomes]
rs11689730	0.81[AFR][1000 genomes]
rs11695627	0.84[AFR][1000 genomes]
rs12479210	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12712142	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12987977	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12998521	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12999364	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13001714	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13017455	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13019081	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1420098	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1420101	0.82[ASN][1000 genomes]
rs1420104	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2160202	0.89[ASN][1000 genomes]
rs2287037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3771171	0.89[ASN][1000 genomes]
rs3771172	0.89[ASN][1000 genomes]
rs4851565	0.84[AFR][1000 genomes]
rs4851566	0.84[AFR][1000 genomes]
rs4851569	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56386507	0.86[ASN][1000 genomes]
rs6543119	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6710885	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs67723747	0.84[ASN][1000 genomes]
rs7558339	0.84[AFR][1000 genomes]
rs7608638	0.84[AFR][1000 genomes]
rs9807962	0.84[AFR][1000 genomes]
rs9807989	0.82[AFR][1000 genomes]
rs9808453	0.84[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)