SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1177234	0.80[CEU][hapmap]
rs1177261	0.82[JPT][hapmap];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1177263	0.81[ASN][1000 genomes]
rs1177264	0.80[CEU][hapmap]
rs1177265	0.81[CEU][hapmap]
rs1177266	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs1177279	1.00[CHB][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs1177280	0.96[ASN][1000 genomes]
rs1177290	0.81[CEU][hapmap]
rs1177294	0.97[ASN][1000 genomes]
rs1177296	0.99[ASN][1000 genomes]
rs1177298	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1186180	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13406000	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1665278	0.81[CEU][hapmap]
rs1665279	0.80[ASN][1000 genomes]
rs1729657	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2441464	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2441465	0.82[AMR][1000 genomes]
rs2564097	0.84[CEU][hapmap];0.91[EUR][1000 genomes]
rs57287858	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
KIAA1841	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)