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rVarBase
SNP Report
Basic Infomation
Name
rs13406000  
dbSNP
Location
chr:2,61303380
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1177279
0.89[ASN][1000 genomes]
rs1177280
0.91[ASN][1000 genomes]
rs1177294
0.90[ASN][1000 genomes]
rs1177295
0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1177296
0.88[ASN][1000 genomes]
rs1177298
0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1186180
0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1729657
0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2441464
0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2564097
0.83[EUR][1000 genomes]
rs57287858
0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
KIAA1841
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)