SNP Report
Name | rs1177283   dbSNP |
---|---|
Location | chr:2,61348804 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1177264 | 0.89[MKK][hapmap];0.82[TSI][hapmap] |
rs1177265 | 0.80[TSI][hapmap] |
rs1177282 | 0.85[JPT][hapmap] |
rs1177284 | 0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs1177285 | 0.85[JPT][hapmap] |
rs1177286 | 1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1177287 | 0.87[CHB][hapmap];0.86[CHD][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes] |
rs1177288 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.95[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1177289 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1177290 | 0.83[TSI][hapmap] |
rs1177293 | 0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs1665263 | 0.88[JPT][hapmap] |
rs1665278 | 0.80[TSI][hapmap] |
rs1729660 | 0.85[JPT][hapmap] |
rs71403390 | 0.87[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
KIAA1841 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014