SNP Report

Basic Infomation

Name	rs11231657 dbSNP
Location	chr:11,63725609
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897466	0.90[LWK][hapmap];0.92[YRI][hapmap];0.82[AFR][1000 genomes]
rs10897471	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.87[TSI][hapmap];0.91[EUR][1000 genomes]
rs11231649	0.88[CEU][hapmap];0.84[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs11231650	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11231658	1.00[EUR][1000 genomes]
rs11231659	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11231660	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11231661	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11231668	0.94[EUR][1000 genomes]
rs11231672	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11601228	0.86[AFR][1000 genomes]
rs12280970	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12283313	1.00[CEU][hapmap];0.82[CHB][hapmap];0.91[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12291575	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs12798491	0.81[LWK][hapmap];0.84[YRI][hapmap]
rs320113	1.00[CEU][hapmap];0.83[GIH][hapmap];0.87[TSI][hapmap];0.91[EUR][1000 genomes]
rs320114	0.91[EUR][1000 genomes]
rs3903058	1.00[EUR][1000 genomes]
rs56687142	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58341870	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60668438	1.00[EUR][1000 genomes]
rs7107584	0.87[TSI][hapmap]
rs7129685	0.95[MKK][hapmap]
rs744864	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7939571	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs873928	1.00[EUR][1000 genomes]
rs9943474	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C11orf84	Distal transcriptional regulation
COX8A	Distal transcriptional regulation
ENSG00000256100	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)