SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10166535	0.89[JPT][hapmap]
rs1024791	0.89[JPT][hapmap]
rs11123913	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1117797	0.83[JPT][hapmap]
rs17026825	0.89[JPT][hapmap]
rs2080311	0.83[JPT][hapmap]
rs2241130	0.88[JPT][hapmap]
rs2287041	0.88[CHB][hapmap]
rs2302612	1.00[CHB][hapmap];0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs3213734	0.83[JPT][hapmap]
rs3755284	0.89[CHB][hapmap]
rs3755285	0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3755287	0.83[JPT][hapmap]
rs3771182	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs3771186	0.83[JPT][hapmap]
rs3771188	0.83[JPT][hapmap]
rs3821206	0.89[JPT][hapmap]
rs6709635	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs6731042	1.00[CHB][hapmap];0.83[JPT][hapmap];0.88[ASN][1000 genomes]
rs6742931	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6754556	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs6758443	1.00[CHB][hapmap];0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs7560478	0.88[JPT][hapmap]
rs7572853	0.89[CHB][hapmap]
rs7572871	0.87[CHB][hapmap]
rs7583215	0.88[CHB][hapmap]
rs955754	1.00[CHB][hapmap];0.83[JPT][hapmap];0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1RL2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)