SNP Report
Name | rs9356743   dbSNP |
---|---|
Location | chr:6,20667688 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1040558 | 0.95[JPT][hapmap] |
rs10946403 | 0.95[JPT][hapmap] |
rs11753081 | 0.95[JPT][hapmap] |
rs12111351 | 0.90[JPT][hapmap] |
rs1569699 | 0.86[JPT][hapmap] |
rs2328528 | 0.83[CEU][hapmap] |
rs2328529 | 0.83[CEU][hapmap] |
rs2328531 | 1.00[ASW][hapmap];0.85[MKK][hapmap] |
rs2328545 | 1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs2328548 | 0.95[JPT][hapmap] |
rs2328549 | 0.90[CEU][hapmap];0.91[JPT][hapmap];0.88[TSI][hapmap] |
rs28665000 | 0.90[EUR][1000 genomes] |
rs2876582 | 0.83[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs4515379 | 0.83[CEU][hapmap] |
rs58048170 | 0.90[EUR][1000 genomes] |
rs58723416 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs6456364 | 1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6456366 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs6931514 | 0.85[CHB][hapmap];0.85[JPT][hapmap] |
rs6935599 | 0.95[JPT][hapmap] |
rs6940200 | 0.83[CEU][hapmap] |
rs72830669 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs742642 | 1.00[CEU][hapmap];0.90[EUR][1000 genomes] |
rs7741604 | 0.88[MEX][hapmap] |
rs7747752 | 0.90[JPT][hapmap] |
rs7756992 | 0.86[JPT][hapmap] |
rs7766844 | 0.83[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs7767391 | 0.90[JPT][hapmap] |
rs7768642 | 0.83[CEU][hapmap] |
rs9295478 | 0.95[JPT][hapmap] |
rs9348440 | 1.00[ASW][hapmap];1.00[CEU][hapmap];0.83[GIH][hapmap];0.81[LWK][hapmap];0.81[MEX][hapmap];0.94[MKK][hapmap];0.88[TSI][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs9350270 | 0.95[CHB][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs9356746 | 0.90[CEU][hapmap];0.95[JPT][hapmap];0.88[MEX][hapmap];0.88[TSI][hapmap] |
rs9356747 | 0.90[JPT][hapmap] |
rs9356748 | 0.90[CEU][hapmap];0.90[JPT][hapmap] |
rs9358357 | 0.95[JPT][hapmap] |
rs9358358 | 0.90[CEU][hapmap];0.95[JPT][hapmap] |
rs9368216 | 1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs9368224 | 0.95[JPT][hapmap] |
rs9368226 | 0.90[JPT][hapmap] |
rs9460550 | 0.95[JPT][hapmap] |
rs9465841 | 0.83[CEU][hapmap] |
rs9465846 | 0.83[CEU][hapmap] |
rs9465847 | 0.83[CEU][hapmap] |
rs9465850 | 0.90[CEU][hapmap] |
rs9465852 | 1.00[ASW][hapmap];0.85[MKK][hapmap] |
rs9465871 | 0.82[CHB][hapmap];0.95[JPT][hapmap] |
Symbol | Regulation type |
---|---|
CDKAL1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014