SNP Report
Name | rs876064   dbSNP |
---|---|
Location | chr:11,64037033 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10792430 | 0.88[YRI][hapmap] |
rs10897488 | 0.88[YRI][hapmap] |
rs11231713 | 1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[JPT][hapmap] |
rs11606081 | 0.88[YRI][hapmap] |
rs1199046 | 0.88[YRI][hapmap] |
rs12146487 | 0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12421615 | 0.95[ASN][1000 genomes] |
rs2096706 | 1.00[ASW][hapmap];0.89[JPT][hapmap] |
rs2186572 | 0.81[CEU][hapmap];0.89[JPT][hapmap] |
rs2286615 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs508168 | 0.88[YRI][hapmap] |
rs516124 | 0.88[YRI][hapmap] |
rs538147 | 0.88[YRI][hapmap] |
rs57831436 | 0.88[EUR][1000 genomes] |
rs58779949 | 0.88[EUR][1000 genomes] |
rs602534 | 0.82[ASN][1000 genomes] |
rs618160 | 0.82[ASN][1000 genomes] |
rs645078 | 0.88[YRI][hapmap] |
rs646384 | 1.00[ASW][hapmap] |
rs660070 | 1.00[ASW][hapmap] |
rs7123026 | 0.89[JPT][hapmap] |
rs915987 | 1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];0.89[MEX][hapmap];0.96[TSI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs947939 | 1.00[ASW][hapmap];0.81[CEU][hapmap];1.00[JPT][hapmap] |
Symbol | Regulation type |
---|---|
GPR137 | Proximal transcriptional regulation |
MESDC2 | Distal transcriptional regulation |
ENSG00000258947 | Distal transcriptional regulation |
ESRRA | Distal transcriptional regulation |
TRMT112 | Distal transcriptional regulation |
PRDX5 | Distal transcriptional regulation |
CCDC88B | Distal transcriptional regulation |
COX8A | Distal transcriptional regulation |
ENSG00000256100 | Distal transcriptional regulation |
GPR137 | Distal transcriptional regulation |
BAD | Distal transcriptional regulation |
KCNK4 | Distal transcriptional regulation |
ENSG00000207024 | Distal transcriptional regulation |
TEX40 | Distal transcriptional regulation |
RPS6KA4 | Distal transcriptional regulation |
MACROD1 | Distal transcriptional regulation |
VPS51 | Distal transcriptional regulation |
ENSG00000257069 | Distal transcriptional regulation |
CBLB | Distal transcriptional regulation |
VCPIP1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014