SNP Report

Basic Infomation

Name	rs8126355 dbSNP
Location	chr:20,30332660
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 49)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1075698	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1994249	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1994250	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1994251	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2376992	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2376996	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3181073	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3203770	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4518038	0.84[EUR][1000 genomes]
rs57726761	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6058421	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6058448	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6058450	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6058460	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6058463	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6058470	0.85[EUR][1000 genomes]
rs6060633	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060644	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060679	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060763	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6060793	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060812	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060821	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060832	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060870	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6060912	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6060923	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6060937	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6060960	0.85[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6060978	0.82[EUR][1000 genomes]
rs6060979	0.82[EUR][1000 genomes]
rs6087778	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6088962	0.93[EUR][1000 genomes]
rs6089050	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6089055	0.97[EUR][1000 genomes]
rs6089058	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6089070	0.94[EUR][1000 genomes]
rs6089071	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6119651	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6119718	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6119720	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6119725	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6119729	0.85[EUR][1000 genomes]
rs6121209	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6121221	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6121242	0.85[EUR][1000 genomes]
rs7263175	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7272062	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7354225	0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TPX2	Distal transcriptional regulation
TPX2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)