SNP Report

Basic Infomation

Name	rs7354225 dbSNP
Location	chr:20,30296881
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 53)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1075698	0.92[EUR][1000 genomes]
rs1994249	0.99[EUR][1000 genomes]
rs1994250	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs1994251	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs2376992	0.94[CEU][hapmap];0.96[EUR][1000 genomes]
rs2376996	0.95[CEU][hapmap];0.96[EUR][1000 genomes]
rs3181073	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs3203770	0.95[CEU][hapmap];0.92[EUR][1000 genomes]
rs4518038	0.94[CEU][hapmap];0.83[EUR][1000 genomes]
rs57726761	0.99[EUR][1000 genomes]
rs6058421	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6058448	0.87[CEU][hapmap];0.95[EUR][1000 genomes]
rs6058450	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs6058460	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs6058463	0.95[CEU][hapmap];0.91[EUR][1000 genomes]
rs6058470	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs6060633	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs6060644	0.96[EUR][1000 genomes]
rs6060679	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060763	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060793	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060812	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060821	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060832	0.99[EUR][1000 genomes]
rs6060870	1.00[CEU][hapmap];0.99[EUR][1000 genomes]
rs6060912	0.94[CEU][hapmap];0.95[EUR][1000 genomes]
rs6060923	0.94[CEU][hapmap];0.94[EUR][1000 genomes]
rs6060937	0.94[EUR][1000 genomes]
rs6060960	0.95[CEU][hapmap];0.92[EUR][1000 genomes]
rs6060979	0.95[CEU][hapmap]
rs6060992	0.95[CEU][hapmap]
rs6087778	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs6088962	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6089050	0.97[EUR][1000 genomes]
rs6089055	0.95[CEU][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6089058	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs6089070	0.95[CEU][hapmap];1.00[YRI][hapmap];0.93[EUR][1000 genomes]
rs6089071	0.95[CEU][hapmap];0.92[EUR][1000 genomes]
rs6089093	0.89[CEU][hapmap]
rs6089094	0.95[CEU][hapmap]
rs6119651	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs6119718	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs6119720	0.94[CEU][hapmap];0.95[EUR][1000 genomes]
rs6119725	0.95[CEU][hapmap];0.92[EUR][1000 genomes]
rs6119729	0.95[CEU][hapmap];0.83[EUR][1000 genomes]
rs6121209	0.97[EUR][1000 genomes]
rs6121221	0.95[EUR][1000 genomes]
rs6121242	0.94[CEU][hapmap];0.83[EUR][1000 genomes]
rs6121246	0.83[CEU][hapmap]
rs7263175	0.95[EUR][1000 genomes]
rs7266148	0.94[CEU][hapmap]
rs7272062	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs8126355	0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
BCL2L1	Distal transcriptional regulation
ID1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)