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rVarBase
SNP Report
Basic Infomation
Name
rs74020121  
dbSNP
Location
chr:15,67466151
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12324906
0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12593904
0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16950687
0.86[ASN][1000 genomes]
rs2033784
0.83[ASN][1000 genomes]
rs2278546
0.88[ASN][1000 genomes]
rs2289259
0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs28434383
0.82[ASN][1000 genomes]
rs4562997
0.85[ASN][1000 genomes]
rs4776344
0.83[ASN][1000 genomes]
rs7164786
0.82[ASN][1000 genomes]
rs7174445
0.83[ASN][1000 genomes]
rs7179893
0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8024330
0.82[ASN][1000 genomes]
rs8032739
0.83[ASN][1000 genomes]
rs9920190
0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
SMAD3
Proximal transcriptional regulation
SMAD3
Distal transcriptional regulation
ENSG00000259202
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)