SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11071939	0.82[CEU][hapmap]
rs12324906	0.90[CHB][hapmap]
rs12593904	0.88[CHB][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs16950687	0.90[LWK][hapmap]
rs17228313	0.82[CEU][hapmap]
rs2278546	0.84[CHB][hapmap]
rs2289259	0.85[CHB][hapmap];0.91[LWK][hapmap];0.82[YRI][hapmap];0.81[ASN][1000 genomes]
rs4776343	0.82[CEU][hapmap]
rs7179893	0.90[CHB][hapmap];0.89[LWK][hapmap];0.80[ASN][1000 genomes]
rs74020121	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SMAD3	Proximal transcriptional regulation
SMAD3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)