SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12593904	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16950687	0.81[ASN][1000 genomes]
rs2278546	1.00[CEU][hapmap];0.95[CHB][hapmap];0.83[ASN][1000 genomes]
rs2289259	1.00[CEU][hapmap];0.94[CHB][hapmap];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4776344	0.90[CHB][hapmap]
rs7179893	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs74020121	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8032739	0.80[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
SMAD3	Distal transcriptional regulation
ENSG00000259202	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)