SNP Report
Name | rs73325349   dbSNP |
---|---|
Location | chr:20,62456913 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1887407 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2180631 | 0.82[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs4578911 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60022917 | 0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6010657 | 0.89[EUR][1000 genomes] |
rs6010662 | 0.88[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs6010663 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6010665 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6010674 | 0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011135 | 0.94[EUR][1000 genomes] |
rs6011153 | 0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011174 | 0.87[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011175 | 0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs6011176 | 0.89[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011178 | 0.97[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs6011179 | 0.83[EUR][1000 genomes] |
rs6011180 | 0.83[EUR][1000 genomes] |
rs61653788 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7270958 | 1.00[ASN][1000 genomes] |
rs73323366 | 0.88[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs73323382 | 0.88[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs73325382 | 0.83[EUR][1000 genomes] |
rs7344617 | 0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs8115050 | 0.83[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ZBTB46 | Distal transcriptional regulation |
ENSG00000269223 | Distal transcriptional regulation |
SLC2A4RG | Distal transcriptional regulation |
ABHD16B | Distal transcriptional regulation |
ENSG00000268858 | Distal transcriptional regulation |
ZBTB46 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014