SNP Report

Basic Infomation

Name	rs6010662 dbSNP
Location	chr:20,62440296
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 46)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11086127	0.81[AFR][1000 genomes]
rs11697261	0.82[AFR][1000 genomes]
rs11698072	0.82[AFR][1000 genomes]
rs11699536	0.84[AFR][1000 genomes]
rs11905140	0.82[AFR][1000 genomes]
rs11906437	0.82[AFR][1000 genomes]
rs11906513	0.81[AFR][1000 genomes]
rs11906517	0.82[AFR][1000 genomes]
rs11908487	0.82[AFR][1000 genomes]
rs1887407	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2180631	0.80[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4578911	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4809348	0.81[AFR][1000 genomes]
rs4809352	0.82[AFR][1000 genomes]
rs4809353	0.82[AFR][1000 genomes]
rs4809354	0.82[AFR][1000 genomes]
rs57498343	0.82[AFR][1000 genomes]
rs58150746	0.81[AFR][1000 genomes]
rs60022917	0.80[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs6010657	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6010658	0.82[AFR][1000 genomes]
rs6010659	0.81[AFR][1000 genomes]
rs6010663	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6010665	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6010674	0.81[EUR][1000 genomes]
rs6011125	0.82[AFR][1000 genomes]
rs6011126	0.82[AFR][1000 genomes]
rs6011128	0.81[AFR][1000 genomes]
rs6011129	0.82[AFR][1000 genomes]
rs6011130	0.84[AFR][1000 genomes]
rs6011135	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6011153	0.94[EUR][1000 genomes]
rs6011175	0.80[AFR][1000 genomes]
rs6011176	0.81[EUR][1000 genomes]
rs61653788	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs66780440	0.80[AFR][1000 genomes]
rs66859979	0.81[AFR][1000 genomes]
rs67078803	0.80[AFR][1000 genomes]
rs67549383	0.82[AFR][1000 genomes]
rs67835080	0.80[AFR][1000 genomes]
rs73323366	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73323382	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73325349	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7344617	0.81[EUR][1000 genomes]
rs73624724	0.80[AFR][1000 genomes]
rs73624726	0.81[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZBTB46	RNA binding protein mediated regulation
ENSG00000231208	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)