SNP Report
Name | rs6010657   dbSNP |
---|---|
Location | chr:20,62430685 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11905798 | 1.00[CHB][hapmap] |
rs1887407 | 0.89[EUR][1000 genomes] |
rs2180631 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs4578911 | 0.89[EUR][1000 genomes] |
rs57620666 | 0.81[AFR][1000 genomes] |
rs6010655 | 0.84[AFR][1000 genomes] |
rs6010656 | 0.84[AFR][1000 genomes] |
rs6010662 | 0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6010663 | 0.83[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6010665 | 0.83[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6011121 | 0.83[AFR][1000 genomes] |
rs6011135 | 0.86[AFR][1000 genomes];0.96[EUR][1000 genomes] |
rs6011153 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs61653788 | 0.89[EUR][1000 genomes] |
rs73323366 | 0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73323382 | 0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs73325349 | 0.89[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
TPD52L2 | Distal transcriptional regulation |
ENSG00000270047 | Distal transcriptional regulation |
ZBTB46 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014