SNP Report

Basic Infomation

Name	rs72644842 dbSNP
Location	chr:12,48448274
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1018973	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10492080	0.83[EUR][1000 genomes]
rs10783226	0.83[EUR][1000 genomes]
rs10783227	0.88[EUR][1000 genomes]
rs11609399	0.83[EUR][1000 genomes]
rs11612578	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11612970	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11613485	0.92[EUR][1000 genomes]
rs11613781	0.83[EUR][1000 genomes]
rs12580764	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12581972	0.87[EUR][1000 genomes]
rs1476608	0.89[EUR][1000 genomes]
rs1635526	0.81[EUR][1000 genomes]
rs17122565	0.81[ASN][1000 genomes]
rs17122611	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17122612	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17122613	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17122651	0.89[EUR][1000 genomes]
rs1793931	0.83[EUR][1000 genomes]
rs1793933	0.83[EUR][1000 genomes]
rs1859441	0.97[EUR][1000 genomes]
rs1859444	0.87[EUR][1000 genomes]
rs1968071	0.89[EUR][1000 genomes]
rs1990029	0.92[EUR][1000 genomes]
rs3742074	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3803183	0.88[EUR][1000 genomes]
rs3803184	0.88[EUR][1000 genomes]
rs3825404	0.88[EUR][1000 genomes]
rs4141065	0.81[EUR][1000 genomes]
rs4293182	0.92[EUR][1000 genomes]
rs4589362	0.89[EUR][1000 genomes]
rs4760611	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4760677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57054831	0.89[EUR][1000 genomes]
rs57380031	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57655233	0.81[EUR][1000 genomes]
rs58046797	0.89[EUR][1000 genomes]
rs58331734	0.83[EUR][1000 genomes]
rs59766465	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60567660	0.89[EUR][1000 genomes]
rs60629297	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60681522	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6580647	0.93[EUR][1000 genomes]
rs6580649	0.91[EUR][1000 genomes]
rs6580651	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7132668	0.91[EUR][1000 genomes]
rs7133249	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs726354	0.83[EUR][1000 genomes]
rs72644841	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72644843	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72644844	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72644845	0.83[EUR][1000 genomes]
rs72644847	0.81[EUR][1000 genomes]
rs7296913	0.89[EUR][1000 genomes]
rs7305954	0.91[EUR][1000 genomes]
rs7312326	0.89[EUR][1000 genomes]
rs757556	0.83[EUR][1000 genomes]
rs7959755	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7963934	0.89[EUR][1000 genomes]
rs7967762	0.93[EUR][1000 genomes]
rs7971668	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs879242	0.83[EUR][1000 genomes]
rs9651993	0.92[EUR][1000 genomes]
rs9805048	0.91[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SENP1	Distal transcriptional regulation
SENP1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)