SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12438412	1.00[CEU][hapmap]
rs12438468	1.00[CEU][hapmap];0.86[CHB][hapmap]
rs12439797	1.00[CEU][hapmap]
rs12440050	1.00[CEU][hapmap]
rs12440233	1.00[CEU][hapmap]
rs12440296	1.00[CEU][hapmap]
rs12440433	1.00[CEU][hapmap]
rs12441772	1.00[CEU][hapmap]
rs12442356	1.00[CEU][hapmap]
rs12442488	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12442767	1.00[CEU][hapmap]
rs12442943	1.00[CEU][hapmap]
rs2286288	1.00[CEU][hapmap]
rs2301604	1.00[ASN][1000 genomes]
rs60434753	0.94[ASN][1000 genomes]
rs6496720	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7163120	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7163132	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7170454	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8032275	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8033093	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs8033935	1.00[CEU][hapmap]
rs8037560	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000259736	Proximal transcriptional regulation
ENSG00000259736	Distal transcriptional regulation
BLM	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)