SNP Report
Basic Infomation
| Name | rs2301604 dbSNP |
|---|---|
| Location | chr:15,91256404 |
| Allele | T/G/C |
LD-proxy of rSNPs(r2>0.8) (count: 28)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12440307 | 1.00[AMR][1000 genomes] |
| rs12440311 | 1.00[AMR][1000 genomes] |
| rs12440433 | 0.83[EUR][1000 genomes] |
| rs12440874 | 0.83[EUR][1000 genomes] |
| rs12442356 | 0.83[EUR][1000 genomes] |
| rs12442488 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12442600 | 1.00[AMR][1000 genomes] |
| rs28384984 | 0.83[EUR][1000 genomes] |
| rs28384999 | 0.83[EUR][1000 genomes] |
| rs28385000 | 0.83[EUR][1000 genomes] |
| rs28385003 | 0.83[EUR][1000 genomes] |
| rs28385009 | 0.83[EUR][1000 genomes] |
| rs28385032 | 0.83[EUR][1000 genomes] |
| rs28385083 | 0.83[EUR][1000 genomes] |
| rs28385088 | 0.83[EUR][1000 genomes] |
| rs28385089 | 0.83[EUR][1000 genomes] |
| rs28385107 | 0.83[EUR][1000 genomes] |
| rs28385120 | 0.83[EUR][1000 genomes] |
| rs60434753 | 0.86[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs6496720 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7163120 | 1.00[ASN][1000 genomes] |
| rs7163132 | 1.00[ASN][1000 genomes] |
| rs7170454 | 1.00[ASN][1000 genomes] |
| rs7183308 | 1.00[ASN][1000 genomes] |
| rs8032275 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8033093 | 1.00[ASN][1000 genomes] |
| rs8033935 | 0.83[EUR][1000 genomes] |
| rs8037560 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| BLM | Proximal transcriptional regulation |
| ENSG00000259736 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014