SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12438412	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs12438468	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12439797	1.00[CEU][hapmap]
rs12440050	1.00[CEU][hapmap]
rs12440233	1.00[CEU][hapmap]
rs12440296	1.00[CEU][hapmap]
rs12440874	1.00[EUR][1000 genomes]
rs12441772	1.00[CEU][hapmap]
rs12442356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs12442488	0.83[EUR][1000 genomes]
rs12442767	1.00[CEU][hapmap]
rs12442943	1.00[CEU][hapmap]
rs2286288	1.00[CEU][hapmap]
rs2301604	0.83[EUR][1000 genomes]
rs28384984	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28384999	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385000	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385003	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385009	1.00[EUR][1000 genomes]
rs28385032	1.00[EUR][1000 genomes]
rs28385083	1.00[EUR][1000 genomes]
rs28385088	1.00[EUR][1000 genomes]
rs28385089	1.00[EUR][1000 genomes]
rs28385107	1.00[EUR][1000 genomes]
rs28385120	1.00[EUR][1000 genomes]
rs7183308	1.00[CEU][hapmap]
rs8032275	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs8033935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs8037560	1.00[CEU][hapmap];0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
BLM	Proximal transcriptional regulation
ENSG00000200677	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)